BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F02LP1|AL426062
(823 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig335 623 e-178
3x_Contig1152 455 e-128
>3x_Contig335
Length = 1920
Score = 623 bits (314), Expect = e-178
Identities = 320/322 (99%)
Strand = Plus / Plus
Query: 1 atttaaaaccaatccataacccatattcatggaataataacgcttccattatattcctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 atttaaaaccaatccataacccatattcatggaataataacgcttccattatattcctag 1633
Query: 61 atcagcctgtaaacgtcggattttcgtacagcgaagaaagagttaaaactacaaatgacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1634 atcagcctgtaaacgtcggattttcgtacagcgaagaaagagttaaaactacaaatgacg 1693
Query: 121 ctgctagagacgtttacaacttcttggatctattctttaccaaatttcccaacttaaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 ctgctagagacgtttacaacttcttggatctattctttaccaaatttcccaacttaaccg 1753
Query: 181 caaacgctttccacatagctggagaatcatatgctggtcattacattcctagaattgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1754 caaacgctttccacatagctggagaatcatatgctggtcattacattcctagaattgccc 1813
Query: 241 atgaaattgtcagtgttcataaggatgatacgaagttcaatctttcatcaattgtgatag 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1814 atgaaattgtcagtgttcataaggatgatacaaagttcaatctttcatcaattgtgatag 1873
Query: 301 gtaacgggcttacagatccatt 322
|||||||||||||| |||||||
Sbjct: 1874 gtaacgggcttacaaatccatt 1895
>3x_Contig1152
Length = 5366
Score = 455 bits (229), Expect = e-128
Identities = 231/233 (99%)
Strand = Plus / Minus
Query: 591 aagaccttaggatatatccgctcttacttgaaccaagaatttgtgcaagacgctctaggt 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5366 aagaccttaggatatatccgctcttacttgaaccaagaatttgtgcaagacgctctaggt 5307
Query: 651 acgaaagtgagcbcgtataacggatgtdatacttcagttgggagcgacttcttcctgacg 710
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5306 acgaaagtgagctcgtataacggatgtaatacttcagttgggagcgacttcttcctgacg 5247
Query: 711 ggtgataatagcaggccattccagcaatatgtgaccgaactgcttgatttgaacattcct 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5246 ggtgataatagcaggccattccagcaatatgtgaccgaactgcttgatttgaacattcct 5187
Query: 771 gtcttgatatatgccggcgatacagactacatatgtaattggttgggtaatat 823
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5186 gtcttgatatatgccggcgatacagactacatatgtaattggttgggtaatat 5134
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5009
Number of Sequences: 1807
Number of extensions: 5009
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 2
length of query: 823
length of database: 10,358,551
effective HSP length: 16
effective length of query: 807
effective length of database: 10,329,639
effective search space: 8336018673
effective search space used: 8336018673
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)